yt.utilities package¶
Subpackages¶
- yt.utilities.amr_kdtree package
- yt.utilities.answer_testing package
- Submodules
- yt.utilities.answer_testing.answer_tests module
VR_image_comparison()
axial_pixelization()
big_patch_amr()
extract_connected_sets()
field_values()
generic_array()
generic_image()
get_field_size_and_mean()
grid_hierarchy()
grid_values()
parentage_relationships()
phase_plot_attribute()
pixelized_projection_values()
plot_window_attribute()
projection_values()
small_patch_amr()
sph_answer()
- yt.utilities.answer_testing.api module
- yt.utilities.answer_testing.framework module
AllFieldValuesTest
AnswerTestCloudStorage
AnswerTestLocalStorage
AnswerTestStorage
AnswerTesting
AnswerTestingTest
AxialPixelizationTest
FieldValuesTest
GenericArrayTest
GridHierarchyTest
GridValuesTest
ParentageRelationshipsTest
PhasePlotAttributeTest
PixelizedParticleProjectionValuesTest
PixelizedProjectionValuesTest
PlotWindowAttributeTest
ProjectionValuesTest
VerifySimulationSameTest
big_patch_amr()
can_run_ds()
compare_image_lists()
create_obj()
data_dir_load()
data_dir_load_v2()
dump_images()
ensure_image_comparability()
nbody_answer()
requires_answer_testing()
requires_ds()
sim_dir_load()
small_patch_amr()
sph_answer()
temp_cwd()
- yt.utilities.answer_testing.level_sets_tests module
- yt.utilities.answer_testing.testing_utilities module
- yt.utilities.answer_testing.answer_tests module
- Module contents
- Submodules
- yt.utilities.grid_data_format package
- yt.utilities.lib package
- Subpackages
- Submodules
- yt.utilities.lib.allocation_container module
- yt.utilities.lib.alt_ray_tracers module
- yt.utilities.lib.amr_kdtools module
- yt.utilities.lib.api module
- yt.utilities.lib.autogenerated_element_samplers module
- yt.utilities.lib.basic_octree module
- yt.utilities.lib.bitarray module
- yt.utilities.lib.bounded_priority_queue module
- yt.utilities.lib.bounding_volume_hierarchy module
- yt.utilities.lib.contour_finding module
- yt.utilities.lib.cosmology_time module
- yt.utilities.lib.cyoctree module
- yt.utilities.lib.depth_first_octree module
- yt.utilities.lib.distance_queue module
- yt.utilities.lib.element_mappings module
ElementSampler
NonlinearSolveSampler2D
NonlinearSolveSampler3D
P1Sampler1D
P1Sampler2D
P1Sampler3D
Q1Sampler2D
Q1Sampler3D
Q2Sampler2D
S2Sampler3D
T2Sampler2D
Tet2Sampler3D
W1Sampler3D
test_hex20_sampler()
test_hex_sampler()
test_linear1D_sampler()
test_quad2_sampler()
test_quad_sampler()
test_tet2_sampler()
test_tetra_sampler()
test_tri2_sampler()
test_tri_sampler()
test_wedge_sampler()
- yt.utilities.lib.fnv_hash module
- yt.utilities.lib.fortran_reader module
- yt.utilities.lib.geometry_utils module
bitwise_addition()
compact_bits()
compare_morton()
compute_morton()
csearch_morton()
dist()
dist_to_box()
get_hilbert_indices()
get_hilbert_points()
get_morton_argsort1()
get_morton_index()
get_morton_indices()
get_morton_indices_unravel()
get_morton_neighbors()
get_morton_neighbors_coarse()
get_morton_neighbors_refined()
get_morton_point()
get_morton_points()
ifrexp_cy()
knn_direct()
knn_morton()
lsb()
lsz()
morton_neighbor()
morton_neighbor_bounded()
morton_neighbor_periodic()
morton_qsort()
morton_qsort_iterative()
morton_qsort_partition()
morton_qsort_recursive()
morton_qsort_swap()
msdb_cy()
quadtree_box()
solution_radius()
spread_bits()
triangle_plane_intersect()
xor_msb_cy()
- yt.utilities.lib.grid_traversal module
- yt.utilities.lib.image_samplers module
- yt.utilities.lib.image_utilities module
- yt.utilities.lib.interpolators module
- yt.utilities.lib.lenses module
- yt.utilities.lib.line_integral_convolution module
- yt.utilities.lib.marching_cubes module
- yt.utilities.lib.mesh_triangulation module
- yt.utilities.lib.mesh_utilities module
- yt.utilities.lib.misc_utilities module
OnceIndirect
count_collisions()
fill_region()
fill_region_float()
flip_bitmask()
flip_morton_bitmask()
get_box_grids_below_level()
get_box_grids_level()
get_color_bounds()
gravitational_binding_energy()
grow_flagging_field()
kdtree_get_choices()
lines()
new_bin_profile1d()
new_bin_profile2d()
new_bin_profile3d()
obtain_position_vector()
obtain_relative_velocity_vector()
rotate_vectors()
zlines()
zpoints()
- yt.utilities.lib.octree_raytracing module
- yt.utilities.lib.origami module
- yt.utilities.lib.particle_kdtree_tools module
- yt.utilities.lib.particle_mesh_operations module
- yt.utilities.lib.partitioned_grid module
- yt.utilities.lib.pixelization_routines module
SPHKernelInterpolationTable
get_rotation_matrix()
interpolate_sph_grid_gather()
interpolate_sph_positions_gather()
normalization_1d_utility()
normalization_2d_utility()
normalization_3d_utility()
off_axis_projection_SPH()
pixelize_aitoff()
pixelize_cartesian()
pixelize_cartesian_nodal()
pixelize_cylinder()
pixelize_element_mesh()
pixelize_element_mesh_line()
pixelize_off_axis_cartesian()
pixelize_sph_kernel_arbitrary_grid()
pixelize_sph_kernel_cutting()
pixelize_sph_kernel_projection()
pixelize_sph_kernel_slice()
rotate_particle_coord()
rotate_particle_coord_pib()
- yt.utilities.lib.points_in_volume module
- yt.utilities.lib.primitives module
- yt.utilities.lib.quad_tree module
- yt.utilities.lib.ragged_arrays module
- yt.utilities.lib.write_array module
- Module contents
- yt.utilities.parallel_tools package
- Submodules
- yt.utilities.parallel_tools.controller_system module
- yt.utilities.parallel_tools.io_runner module
- yt.utilities.parallel_tools.parallel_analysis_interface module
CommunicationSystem
Communicator
FilterAllMessages
GroupOwnership
ObjectIterator
ParallelAnalysisInterface
ParallelDummy
ParallelObjectIterator
ProcessorPool
ResultsStorage
Workgroup
default_mpi_excepthook()
enable_parallelism()
get_mpi_type()
parallel_blocking_call()
parallel_objects()
parallel_passthrough()
parallel_ring()
parallel_root_only()
parallel_root_only_then_broadcast()
parallel_simple_proxy()
traceback_writer_hook()
- yt.utilities.parallel_tools.task_queue module
- Module contents
- Submodules
Submodules¶
- yt.utilities.api module
- yt.utilities.chemical_formulas module
- yt.utilities.command_line module
FileStreamer
GetParameterFiles
YTCommand
YTCommandSubtype
YTConfigGetCmd
YTConfigListCmd
YTConfigLocalConfigHandler
YTConfigPrintPath
YTConfigRemoveCmd
YTConfigSetCmd
YTDeleteImageCmd
YTDownloadData
YTInstInfoCmd
YTLoadCmd
YTMapserverCmd
YTPastebinCmd
YTPastebinGrabCmd
YTPlotCmd
YTRPDBCmd
YTSearchCmd
YTStatsCmd
YTUpdateCmd
YTUploadFileCmd
YTUploadImageCmd
run_main()
- yt.utilities.configuration_tree module
ConfigLeaf
ConfigNode
ConfigNode.add()
ConfigNode.add_child()
ConfigNode.as_dict()
ConfigNode.from_dict()
ConfigNode.get()
ConfigNode.get_child()
ConfigNode.get_deepest_leaf()
ConfigNode.get_from_list()
ConfigNode.get_leaf()
ConfigNode.pop_leaf()
ConfigNode.remove_child()
ConfigNode.serialize()
ConfigNode.update()
ConfigNode.upsert_from_list()
- yt.utilities.configure module
- yt.utilities.cosmology module
Cosmology
Cosmology.a_from_t()
Cosmology.age_integrand()
Cosmology.angular_diameter_distance()
Cosmology.angular_scale()
Cosmology.arr
Cosmology.comoving_radial_distance()
Cosmology.comoving_transverse_distance()
Cosmology.comoving_volume()
Cosmology.critical_density()
Cosmology.expansion_factor()
Cosmology.get_dark_factor()
Cosmology.hubble_distance()
Cosmology.hubble_parameter()
Cosmology.inverse_expansion_factor()
Cosmology.lookback_time()
Cosmology.luminosity_distance()
Cosmology.path_length()
Cosmology.path_length_function()
Cosmology.quan
Cosmology.t_from_a()
Cosmology.t_from_z()
Cosmology.z_from_t()
InterpTable
trapezoid_cumulative_integral()
trapezoid_int()
trapzint()
- yt.utilities.cython_fortran_utils module
- yt.utilities.decompose module
- yt.utilities.definitions module
- yt.utilities.exceptions module
EnzoTestOutputFileNonExistent
GenerationInProgress
InvalidSimulationTimeSeries
MissingParameter
MountError
NoStoppingCondition
YTAmbiguousDataType
YTArrayTooLargeToDisplay
YTAxesNotOrthogonalError
YTBooleanObjectError
YTBooleanObjectsWrongDataset
YTBoundsDefinitionError
YTCannotParseFieldDisplayName
YTCannotParseUnitDisplayName
YTCloudError
YTCommandRequiresModule
YTConfigurationError
YTCoordinateNotImplemented
YTCouldNotGenerateField
YTDataSelectorNotImplemented
YTDataTypeUnsupported
YTDimensionalityError
YTDomainOverflow
YTDuplicateFieldInProfile
YTElementTypeNotRecognized
YTEllipsoidOrdering
YTException
YTFieldNotFound
YTFieldNotParseable
YTFieldTypeNotFound
YTFieldUnitError
YTFieldUnitParseError
YTFileNotParseable
YTGDFAlreadyExists
YTGDFUnknownGeometry
YTHubRegisterError
YTIllDefinedAMR
YTIllDefinedAMRData
YTIllDefinedBounds
YTIllDefinedCutRegion
YTIllDefinedFilter
YTIllDefinedParticleData
YTIllDefinedParticleFilter
YTIllDefinedProfile
YTInconsistentGridFieldShape
YTInconsistentGridFieldShapeGridDims
YTInconsistentParticleFieldShape
YTIntDomainOverflow
YTInvalidFieldType
YTInvalidPositionArray
YTInvalidShaderType
YTInvalidUnitEquivalence
YTInvalidWidthError
YTMixedCutRegion
YTModuleRemoved
YTNoAPIKey
YTNoAnswerNameSpecified
YTNoDataInObjectError
YTNoFilenamesMatchPattern
YTNoOldAnswer
YTNonIndexedDataContainer
YTNotInsideNotebook
YTObjectNotImplemented
YTParticleDepositionNotImplemented
YTParticleOutputFormatNotImplemented
YTParticleTypeNotFound
YTPixelizeError
YTPlotCallbackError
YTProfileDataShape
YTRockstarMultiMassNotSupported
YTSceneFieldNotFound
YTSimulationNotIdentified
YTSpatialFieldUnitError
YTSphereTooSmall
YTTooManyVertices
YTTooParallel
YTUnidentifiedDataType
YTUnitNotRecognized
YTUnknownUniformKind
YTUnknownUniformSize
YTUnsupportedPlotCallback
screen_one_element_list()
- yt.utilities.file_handler module
- yt.utilities.flagging_methods module
- yt.utilities.fortran_utils module
- yt.utilities.hierarchy_inspection module
- yt.utilities.initial_conditions module
- yt.utilities.io_handler module
- yt.utilities.linear_interpolators module
- yt.utilities.lodgeit module
- yt.utilities.logger module
- yt.utilities.math_utils module
compute_cylindrical_radius()
compute_parallel_velocity()
compute_radial_velocity()
compute_rotational_velocity()
compute_stddev_image()
euclidean_dist()
get_cyl_r()
get_cyl_r_component()
get_cyl_theta()
get_cyl_theta_component()
get_cyl_z()
get_cyl_z_component()
get_lookat_matrix()
get_orthographic_matrix()
get_perspective_matrix()
get_rotation_matrix()
get_scale_matrix()
get_sph_phi()
get_sph_phi_component()
get_sph_r()
get_sph_r_component()
get_sph_theta()
get_sph_theta_component()
get_translate_matrix()
modify_reference_frame()
normalize_vector()
ortho_find()
periodic_dist()
periodic_position()
periodic_ray()
quartiles()
quaternion_mult()
quaternion_to_rotation_matrix()
resize_vector()
rotate_vector_3D()
rotation_matrix_to_quaternion()
- yt.utilities.mesh_code_generation module
- yt.utilities.metadata module
- yt.utilities.minimal_representation module
- yt.utilities.nodal_data_utils module
- yt.utilities.object_registries module
- yt.utilities.on_demand_imports module
NotAModule
NotCartopy
NotMiniball
OnDemand
astropy_imports
cartopy_imports
f90nml_imports
firefly_imports
h5py_imports
libconf_imports
miniball_imports
netCDF4_imports
nose_imports
pandas_imports
pooch_imports
pyart_imports
ratarmount_imports
regions_imports
requests_imports
safe_import()
scipy_imports
xarray_imports
yaml_imports
- yt.utilities.operator_registry module
OperatorRegistry
OperatorRegistry.clear()
OperatorRegistry.copy()
OperatorRegistry.find()
OperatorRegistry.fromkeys()
OperatorRegistry.get()
OperatorRegistry.items()
OperatorRegistry.keys()
OperatorRegistry.pop()
OperatorRegistry.popitem()
OperatorRegistry.setdefault()
OperatorRegistry.update()
OperatorRegistry.values()
- yt.utilities.orientation module
- yt.utilities.parameter_file_storage module
- yt.utilities.particle_generator module
- yt.utilities.performance_counters module
- yt.utilities.periodic_table module
- yt.utilities.physical_constants module
- yt.utilities.physical_ratios module
- yt.utilities.png_writer module
- yt.utilities.rpdb module
PdbXMLRPCServer
PdbXMLRPCServer.address_family
PdbXMLRPCServer.allow_reuse_address
PdbXMLRPCServer.allow_reuse_port
PdbXMLRPCServer.close_request()
PdbXMLRPCServer.fileno()
PdbXMLRPCServer.finish_request()
PdbXMLRPCServer.finished
PdbXMLRPCServer.get_request()
PdbXMLRPCServer.handle_error()
PdbXMLRPCServer.handle_request()
PdbXMLRPCServer.handle_timeout()
PdbXMLRPCServer.process_request()
PdbXMLRPCServer.register_function()
PdbXMLRPCServer.register_instance()
PdbXMLRPCServer.register_introspection_functions()
PdbXMLRPCServer.register_multicall_functions()
PdbXMLRPCServer.register_signal()
PdbXMLRPCServer.request_queue_size
PdbXMLRPCServer.serve_forever()
PdbXMLRPCServer.server_activate()
PdbXMLRPCServer.server_bind()
PdbXMLRPCServer.server_close()
PdbXMLRPCServer.service_actions()
PdbXMLRPCServer.shutdown()
PdbXMLRPCServer.shutdown_request()
PdbXMLRPCServer.signal_handler()
PdbXMLRPCServer.socket_type
PdbXMLRPCServer.system_listMethods()
PdbXMLRPCServer.system_methodHelp()
PdbXMLRPCServer.system_methodSignature()
PdbXMLRPCServer.system_multicall()
PdbXMLRPCServer.timeout
PdbXMLRPCServer.verify_request()
pdb_handler
rpdb_cmd
rpdb_cmd.cmdloop()
rpdb_cmd.columnize()
rpdb_cmd.complete()
rpdb_cmd.complete_help()
rpdb_cmd.completedefault()
rpdb_cmd.completenames()
rpdb_cmd.default()
rpdb_cmd.do_help()
rpdb_cmd.do_shutdown()
rpdb_cmd.doc_header
rpdb_cmd.doc_leader
rpdb_cmd.emptyline()
rpdb_cmd.get_names()
rpdb_cmd.identchars
rpdb_cmd.intro
rpdb_cmd.lastcmd
rpdb_cmd.misc_header
rpdb_cmd.nohelp
rpdb_cmd.onecmd()
rpdb_cmd.parseline()
rpdb_cmd.postcmd()
rpdb_cmd.postloop()
rpdb_cmd.precmd()
rpdb_cmd.preloop()
rpdb_cmd.print_topics()
rpdb_cmd.prompt
rpdb_cmd.ruler
rpdb_cmd.undoc_header
rpdb_cmd.use_rawinput
rpdb_excepthook()
run_rpdb()
- yt.utilities.sdf module
DataStruct
HTTPDataStruct
HTTPSDFRead
HTTPSDFRead.clear()
HTTPSDFRead.copy()
HTTPSDFRead.fromkeys()
HTTPSDFRead.get()
HTTPSDFRead.items()
HTTPSDFRead.keys()
HTTPSDFRead.load_memmaps()
HTTPSDFRead.parse_header()
HTTPSDFRead.parse_line()
HTTPSDFRead.parse_struct()
HTTPSDFRead.pop()
HTTPSDFRead.popitem()
HTTPSDFRead.set_offsets()
HTTPSDFRead.setdefault()
HTTPSDFRead.update()
HTTPSDFRead.values()
HTTPSDFRead.write()
RedirectArray
SDFIndex
SDFIndex.filter_bbox()
SDFIndex.filter_particles()
SDFIndex.filter_sphere()
SDFIndex.find_max_cell()
SDFIndex.find_max_cell_center()
SDFIndex.get_bbox()
SDFIndex.get_cell_bbox()
SDFIndex.get_cell_data()
SDFIndex.get_cell_width()
SDFIndex.get_contiguous_chunk()
SDFIndex.get_data()
SDFIndex.get_ibbox()
SDFIndex.get_ibbox_slow()
SDFIndex.get_ind_from_key()
SDFIndex.get_key()
SDFIndex.get_key_bounds()
SDFIndex.get_key_data()
SDFIndex.get_key_ijk()
SDFIndex.get_key_slow()
SDFIndex.get_keyv()
SDFIndex.get_next_nonzero_chunk()
SDFIndex.get_nparticles_bbox()
SDFIndex.get_padded_bbox_data()
SDFIndex.get_previous_nonzero_chunk()
SDFIndex.get_slice_chunks()
SDFIndex.get_slice_key()
SDFIndex.iter_bbox_data()
SDFIndex.iter_data()
SDFIndex.iter_filtered_bbox_fields()
SDFIndex.iter_ibbox_data()
SDFIndex.iter_padded_bbox_data()
SDFIndex.iter_padded_bbox_keys()
SDFIndex.iter_slice_data()
SDFIndex.iter_sphere_data()
SDFIndex.set_bounds()
SDFIndex.spread_bits()
SDFIndex.spread_bitsv()
SDFRead
SDFRead.clear()
SDFRead.copy()
SDFRead.fromkeys()
SDFRead.get()
SDFRead.items()
SDFRead.keys()
SDFRead.load_memmaps()
SDFRead.parse_header()
SDFRead.parse_line()
SDFRead.parse_struct()
SDFRead.pop()
SDFRead.popitem()
SDFRead.set_offsets()
SDFRead.setdefault()
SDFRead.update()
SDFRead.values()
SDFRead.write()
bbox_filter()
get_keyv()
get_thingking_deps()
load_sdf()
sphere_filter()
spread_bitsv()
- yt.utilities.tree_container module